LocusCompare is a suite of tools for visualizing and interpreting the colocalization of genetic association summary statistics — helping researchers judge whether a GWAS signal and an eQTL signal point to the same causal variant.

LocusCompare

LocusCompare

The original LocusCompare shares one plotting engine across a web app and R / Python packages, so the same LocusCompare and LocusZoom colocalization plots are always just a click or a function call away.

LocusCompare2

A separate, next-generation platform that runs an ensemble of six GWAS-to-gene colocalization methods — coloc, eCAVIAR, fastENLOC, FUSION, PrediXcan, and SMR — across 280+ pre-loaded eQTL datasets, giving cross-validated results in a single analysis.

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